Revert "Merge pull request 'Merge all 5 batch PRs: security, CLI features, protocol, performance, tests/docs' (#143) from merge-all-v2 into main"

This reverts commit 29f4f8cde6, reversing
changes made to c6bf7bb84e.

src/client/scanner.c

@@ -9,53 +9,101 @@
 #include <stdlib.h>
 #include <string.h>
 #include <sys/stat.h>
-#include <threads.h>
 #include <unistd.h>
 
-typedef struct {
-  char* path;
-  int depth;
-} DirEntry;
-
-static void dir_entry_destroy(void* item) {
-  if (item) {
-    DirEntry* de = (DirEntry*)item;
-    free(de->path);
-    free(de);
-  }
-}
-
-static DirEntry* dir_entry_create(const char* path, int depth) {
-  DirEntry* de = malloc(sizeof(DirEntry));
-  if (de) {
-    de->path = str_dup(path);
-    de->depth = depth;
-  }
-  return de;
-}
-
-DirectoryScanner* directory_scanner_create(const char* root_directory, bool use_metadata,
+DirectoryScanner* directory_scanner_create(char* root_directory, bool use_metadata,
                                            unsigned long long chunk_size, char** exclude_patterns,
                                            int exclude_count, char** include_patterns,
                                            int include_count, unsigned long long max_size,
-                                           unsigned long long min_size, int max_depth) {
+                                           unsigned long long min_size) {
+  return directory_scanner_create_full(root_directory, use_metadata, chunk_size, exclude_patterns,
+                                       exclude_count, include_patterns, include_count, max_size,
+                                       min_size, true);
+}
+
+DirectoryScanner* directory_scanner_create_full(char* root_directory, bool use_metadata,
+                                                unsigned long long chunk_size,
+                                                char** exclude_patterns, int exclude_count,
+                                                char** include_patterns, int include_count,
+                                                unsigned long long max_size,
+                                                unsigned long long min_size, bool follow_symlinks) {
   DirectoryScanner* scanner = malloc(sizeof(DirectoryScanner));
   if (scanner == NULL)
     return NULL;
-  scanner->directories = queue_create(100, dir_entry_destroy);
+  scanner->directories = queue_create(100, free);
   scanner->current_dir = NULL;
   scanner->current_path = NULL;
   scanner->use_metadata = use_metadata;
   scanner->chunk_size = chunk_size > 0 ? chunk_size : DESIRED_CHUNK_SIZE;
-  scanner->exclude_patterns = exclude_patterns;
+  /* Deep-copy exclude patterns */
+  if (exclude_count > 0 && exclude_patterns != NULL) {
+    scanner->exclude_patterns = malloc((size_t)exclude_count * sizeof(char*));
+    if (scanner->exclude_patterns == NULL) {
+      queue_destroy(scanner->directories);
+      free(scanner);
+      return NULL;
+    }
+    for (int i = 0; i < exclude_count; i++) {
+      scanner->exclude_patterns[i] = str_dup(exclude_patterns[i]);
+      if (scanner->exclude_patterns[i] == NULL) {
+        for (int j = 0; j < i; j++)
+          free(scanner->exclude_patterns[j]);
+        free(scanner->exclude_patterns);
+        queue_destroy(scanner->directories);
+        free(scanner);
+        return NULL;
+      }
+    }
+  } else {
+    scanner->exclude_patterns = NULL;
+  }
   scanner->exclude_count = exclude_count;
-  scanner->include_patterns = include_patterns;
+
+  /* Deep-copy include patterns */
+  if (include_count > 0 && include_patterns != NULL) {
+    scanner->include_patterns = malloc((size_t)include_count * sizeof(char*));
+    if (scanner->include_patterns == NULL) {
+      for (int i = 0; i < exclude_count; i++)
+        free(scanner->exclude_patterns[i]);
+      free(scanner->exclude_patterns);
+      queue_destroy(scanner->directories);
+      free(scanner);
+      return NULL;
+    }
+    for (int i = 0; i < include_count; i++) {
+      scanner->include_patterns[i] = str_dup(include_patterns[i]);
+      if (scanner->include_patterns[i] == NULL) {
+        for (int j = 0; j < i; j++)
+          free(scanner->include_patterns[j]);
+        free(scanner->include_patterns);
+        for (int j = 0; j < exclude_count; j++)
+          free(scanner->exclude_patterns[j]);
+        free(scanner->exclude_patterns);
+        queue_destroy(scanner->directories);
+        free(scanner);
+        return NULL;
+      }
+    }
+  } else {
+    scanner->include_patterns = NULL;
+  }
   scanner->include_count = include_count;
   scanner->max_size = max_size;
   scanner->min_size = min_size;
-  scanner->max_depth = max_depth;
-  scanner->current_depth = 0;
-  queue_enqueue(scanner->directories, dir_entry_create(root_directory, 0));
+  scanner->follow_symlinks = follow_symlinks;
+  char* root_copy = str_dup(root_directory);
+  if (root_copy == NULL) {
+    for (int i = 0; i < scanner->include_count; i++)
+      free(scanner->include_patterns[i]);
+    free(scanner->include_patterns);
+    for (int i = 0; i < scanner->exclude_count; i++)
+      free(scanner->exclude_patterns[i]);
+    free(scanner->exclude_patterns);
+    queue_destroy(scanner->directories);
+    free(scanner);
+    return NULL;
+  }
+  queue_enqueue(scanner->directories, root_copy);
   return scanner;
 }
 
@@ -67,6 +115,12 @@ void directory_scanner_destroy(DirectoryScanner* scanner) {
     scanner->current_dir = NULL;
   }
   free(scanner->current_path);
+  for (int i = 0; i < scanner->exclude_count; i++)
+    free(scanner->exclude_patterns[i]);
+  free(scanner->exclude_patterns);
+  for (int i = 0; i < scanner->include_count; i++)
+    free(scanner->include_patterns[i]);
+  free(scanner->include_patterns);
   queue_destroy(scanner->directories);
   free(scanner);
 }
@@ -80,6 +134,7 @@ static Chunk* chunk_data_to_chunk(ArrayList* chunk_data) {
   return chunk;
 }
 
+// Returns: 1 on success, 0 if no more directories in queue, -1 on opendir failure
 static int open_next_directory(DirectoryScanner* scanner) {
   if (scanner->current_dir) {
     closedir(scanner->current_dir);
@@ -90,10 +145,7 @@ static int open_next_directory(DirectoryScanner* scanner) {
   if (queue_is_empty(scanner->directories))
     return 0;
 
-  DirEntry* de = (DirEntry*)queue_dequeue(scanner->directories);
-  scanner->current_path = de->path;
-  scanner->current_depth = de->depth;
-  free(de);
+  scanner->current_path = (char*)queue_dequeue(scanner->directories);
   scanner->current_dir = opendir(scanner->current_path);
   if (scanner->current_dir == NULL) {
     perror("Could not open directory");
@@ -131,24 +183,82 @@ Chunk* directory_scanner_next(DirectoryScanner* scanner) {
 
     char* cur_path = path_cat(scanner->current_path, entry->d_name);
     struct stat stats;
-    if (stat(cur_path, &stats) != 0) {
+    // Use lstat to detect symlinks
+    if (lstat(cur_path, &stats) != 0) {
       free(cur_path);
       continue;
     }
 
-    if (S_ISDIR(stats.st_mode)) {
-      int next_depth = scanner->current_depth + 1;
-      if (scanner->max_depth <= 0 || next_depth < scanner->max_depth) {
-        DirEntry* de = dir_entry_create(cur_path, next_depth);
-        if (!queue_enqueue(scanner->directories, de))
-          dir_entry_destroy(de);
-      }
-      free(cur_path);
-    } else {
-      if (scanner->max_depth > 0 && scanner->current_depth + 1 > scanner->max_depth) {
+    // If follow_symlinks is enabled and this is a symlink, resolve it
+    if (scanner->follow_symlinks && S_ISLNK(stats.st_mode)) {
+      struct stat target_stats;
+      if (stat(cur_path, &target_stats) != 0) {
+        // Broken symlink, skip
         free(cur_path);
         continue;
       }
+      stats = target_stats;
+    }
+
+    if (S_ISDIR(stats.st_mode)) {
+      queue_enqueue(scanner->directories, (void*)cur_path);
+    } else if (S_ISLNK(stats.st_mode)) {
+      // Handle symlink (not following)
+      bool excluded = false;
+      for (int i = 0; i < scanner->exclude_count; i++) {
+        if (glob_match(scanner->exclude_patterns[i], entry->d_name)) {
+          excluded = true;
+          break;
+        }
+      }
+      if (excluded) {
+        free(cur_path);
+        continue;
+      }
+
+      if (scanner->include_count > 0) {
+        bool included = false;
+        for (int i = 0; i < scanner->include_count; i++) {
+          if (glob_match(scanner->include_patterns[i], entry->d_name)) {
+            included = true;
+            break;
+          }
+        }
+        if (!included) {
+          free(cur_path);
+          continue;
+        }
+      }
+
+      File* file = file_create(cur_path);
+      if (file == NULL) {
+        free(cur_path);
+        continue;
+      }
+      file->type = FILE_TYPE_SYMLINK;
+      // Read link target
+      char link_buf[4096];
+      ssize_t link_len = readlink(cur_path, link_buf, sizeof(link_buf) - 1);
+      if (link_len >= 0) {
+        link_buf[link_len] = '\0';
+        file->link_target = str_dup(link_buf);
+        if (file->link_target == NULL) {
+          file_destroy(file);
+          free(cur_path);
+          continue;
+        }
+      }
+      file->data->size = 0;
+      if (scanner->use_metadata)
+        file->metadata = file_metadata_create(&stats);
+      array_list_add(chunk_data, file);
+      chunk_data_size += 1; // small size for symlinks
+      if (chunk_data_size > scanner->chunk_size) {
+        free(cur_path);
+        return chunk_data_to_chunk(chunk_data);
+      }
+      free(cur_path);
+    } else {
       bool excluded = false;
       for (int i = 0; i < scanner->exclude_count; i++) {
         if (glob_match(scanner->exclude_patterns[i], entry->d_name)) {
@@ -204,256 +314,3 @@ Chunk* directory_scanner_next(DirectoryScanner* scanner) {
   array_list_delete(chunk_data);
   return NULL;
 }
-
-typedef struct {
-  ParallelScanner* ps;
-  char** dirs;
-  int dir_count;
-  bool use_metadata;
-  unsigned long long chunk_size;
-  char** exclude_patterns;
-  int exclude_count;
-  char** include_patterns;
-  int include_count;
-  unsigned long long max_size;
-  unsigned long long min_size;
-  int max_depth;
-} ParallelWorkerArg;
-
-static int parallel_worker_thread(void* arg) {
-  ParallelWorkerArg* wa = (ParallelWorkerArg*)arg;
-  for (int i = 0; i < wa->dir_count; i++) {
-    DirectoryScanner* ds = directory_scanner_create(
-        wa->dirs[i], wa->use_metadata, wa->chunk_size, wa->exclude_patterns, wa->exclude_count,
-        wa->include_patterns, wa->include_count, wa->max_size, wa->min_size, wa->max_depth);
-    Chunk* chunk;
-    while ((chunk = directory_scanner_next(ds)) != NULL) {
-      queue_enqueue_multithreaded(wa->ps->result_queue, chunk, &wa->ps->result_mutex,
-                                  &wa->ps->result_not_empty, &wa->ps->result_not_full);
-    }
-    directory_scanner_destroy(ds);
-    free(wa->dirs[i]);
-  }
-  ParallelScanner* ps = wa->ps;
-  free(wa->dirs);
-  free(wa);
-  mtx_lock(&ps->result_mutex);
-  ps->completed++;
-  if (ps->completed >= ps->num_threads) {
-    ps->done = true;
-    cnd_signal(&ps->result_not_empty);
-  }
-  mtx_unlock(&ps->result_mutex);
-  return thrd_success;
-}
-
-ParallelScanner* parallel_scanner_create(char* root_directory, bool use_metadata,
-                                         unsigned long long chunk_size, char** exclude_patterns,
-                                         int exclude_count, char** include_patterns,
-                                         int include_count, unsigned long long max_size,
-                                         unsigned long long min_size, int max_depth,
-                                         int num_threads) {
-  ParallelScanner* ps = calloc(1, sizeof(ParallelScanner));
-  if (!ps)
-    return NULL;
-  ps->result_queue = queue_create(100, chunk_destroy);
-  if (!ps->result_queue) {
-    free(ps);
-    return NULL;
-  }
-  if (mtx_init(&ps->result_mutex, mtx_plain) != thrd_success ||
-      cnd_init(&ps->result_not_empty) != thrd_success ||
-      cnd_init(&ps->result_not_full) != thrd_success) {
-    queue_destroy(ps->result_queue);
-    free(ps);
-    return NULL;
-  }
-
-  DIR* dir = opendir(root_directory);
-  if (!dir) {
-    perror("Could not open root directory for parallel scan");
-    parallel_scanner_destroy(ps);
-    return NULL;
-  }
-
-  ArrayList* root_files = array_list_create(file_destroy);
-  ArrayList* subdirs = array_list_create(free);
-  struct dirent* entry;
-  while ((entry = readdir(dir)) != NULL) {
-    if (strcmp(entry->d_name, ".") == 0 || strcmp(entry->d_name, "..") == 0)
-      continue;
-    char* cur_path = path_cat(root_directory, entry->d_name);
-    if (!cur_path)
-      continue;
-    struct stat st;
-    if (stat(cur_path, &st) != 0) {
-      free(cur_path);
-      continue;
-    }
-    if (S_ISDIR(st.st_mode)) {
-      array_list_add(subdirs, cur_path);
-    } else {
-      bool excluded = false;
-      for (int i = 0; i < exclude_count; i++) {
-        if (glob_match(exclude_patterns[i], entry->d_name)) {
-          excluded = true;
-          break;
-        }
-      }
-      if (excluded) {
-        free(cur_path);
-        continue;
-      }
-      if (include_count > 0) {
-        bool included = false;
-        for (int i = 0; i < include_count; i++) {
-          if (glob_match(include_patterns[i], entry->d_name)) {
-            included = true;
-            break;
-          }
-        }
-        if (!included) {
-          free(cur_path);
-          continue;
-        }
-      }
-      if ((max_size > 0 && (unsigned long long)st.st_size > max_size) ||
-          (min_size > 0 && (unsigned long long)st.st_size < min_size)) {
-        free(cur_path);
-        continue;
-      }
-      File* file = file_create(cur_path);
-      free(cur_path);
-      if (!file)
-        continue;
-      file->data->size = st.st_size;
-      if (use_metadata)
-        file->metadata = file_metadata_create(&st);
-      array_list_add(root_files, file);
-    }
-  }
-  closedir(dir);
-
-  unsigned long long cs = chunk_size > 0 ? chunk_size : DESIRED_CHUNK_SIZE;
-  if (root_files->size > 0) {
-    ArrayList* batch = array_list_create(NULL);
-    unsigned long long batch_size = 0;
-    Chunk* first = NULL;
-    for (int i = 0; i < root_files->size; i++) {
-      File* f = (File*)root_files->items[i];
-      array_list_add(batch, f);
-      batch_size += f->data->size;
-      if (batch_size >= cs || i == root_files->size - 1) {
-        void** items = array_list_to_array(batch);
-        Chunk* c = chunk_create((File**)items, batch->size);
-        free(items);
-        batch->item_destroyer = NULL;
-        array_list_delete(batch);
-        batch = NULL;
-        if (!first) {
-          first = c;
-        } else {
-          queue_enqueue_multithreaded(ps->result_queue, c, &ps->result_mutex, &ps->result_not_empty,
-                                      &ps->result_not_full);
-        }
-        if (i < root_files->size - 1) {
-          batch = array_list_create(NULL);
-          batch_size = 0;
-        }
-      }
-    }
-    if (batch) {
-      batch->item_destroyer = NULL;
-      array_list_delete(batch);
-    }
-    ps->initial_chunk = first;
-    root_files->item_destroyer = NULL;
-  }
-  array_list_delete(root_files);
-
-  int n = num_threads > 0 ? num_threads : 4;
-  if (n > subdirs->size)
-    n = subdirs->size > 0 ? subdirs->size : 1;
-
-  if (subdirs->size > 0) {
-    ps->num_threads = n;
-    ps->threads = calloc(n, sizeof(thrd_t));
-    if (!ps->threads) {
-      array_list_delete(subdirs);
-      parallel_scanner_destroy(ps);
-      return NULL;
-    }
-    int dirs_per_thread = subdirs->size / n;
-    int remainder = subdirs->size % n;
-    int start = 0;
-    for (int t = 0; t < n; t++) {
-      int count = dirs_per_thread + (t < remainder ? 1 : 0);
-      if (count == 0)
-        break;
-      ParallelWorkerArg* wa = calloc(1, sizeof(ParallelWorkerArg));
-      if (!wa)
-        break;
-      wa->ps = ps;
-      wa->dirs = calloc(count, sizeof(char*));
-      if (!wa->dirs) {
-        free(wa);
-        break;
-      }
-      for (int j = 0; j < count; j++)
-        wa->dirs[j] = str_dup((char*)subdirs->items[start + j]);
-      wa->dir_count = count;
-      wa->use_metadata = use_metadata;
-      wa->chunk_size = cs;
-      wa->exclude_patterns = exclude_patterns;
-      wa->exclude_count = exclude_count;
-      wa->include_patterns = include_patterns;
-      wa->include_count = include_count;
-      wa->max_size = max_size;
-      wa->min_size = min_size;
-      wa->max_depth = max_depth;
-      start += count;
-      if (thrd_create(&ps->threads[t], parallel_worker_thread, wa) != thrd_success) {
-        for (int j = 0; j < count; j++)
-          free(wa->dirs[j]);
-        free(wa->dirs);
-        free(wa);
-        ps->num_threads = t;
-        break;
-      }
-    }
-  }
-  array_list_delete(subdirs);
-  return ps;
-}
-
-Chunk* parallel_scanner_next(ParallelScanner* ps) {
-  if (ps->initial_chunk) {
-    Chunk* c = ps->initial_chunk;
-    ps->initial_chunk = NULL;
-    return c;
-  }
-  if (ps->num_threads == 0) {
-    ps->done = true;
-    return NULL;
-  }
-  Chunk* chunk = queue_dequeue_multithreaded(
-      ps->result_queue, &ps->result_mutex, &ps->result_not_empty, &ps->result_not_full, &ps->done);
-  return chunk;
-}
-
-void parallel_scanner_destroy(ParallelScanner* ps) {
-  if (!ps)
-    return;
-  ps->done = true;
-  cnd_signal(&ps->result_not_empty);
-  for (int i = 0; i < ps->num_threads; i++)
-    thrd_join(ps->threads[i], NULL);
-  free(ps->threads);
-  if (ps->initial_chunk)
-    chunk_destroy(ps->initial_chunk);
-  queue_destroy(ps->result_queue);
-  mtx_destroy(&ps->result_mutex);
-  cnd_destroy(&ps->result_not_empty);
-  cnd_destroy(&ps->result_not_full);
-  free(ps);
-}