refactor: standardize error reporting on the log module

- Add log_perror() helper (context + strerror(errno)) to the log module
- Replace all bare perror() calls with log_perror() so errors are routed
  through the unified logger (stderr sink + optional --log-file sink)
- Convert fprintf(stderr, "Error:/Warning: ...") in client code to
  log_message(); raw fprintf kept only for progress/stats output

src/shared/array_list.c

@@ -1,3 +1,4 @@
+#include "log.h"
 #include "array_list.h"
 #include <stdio.h>
 #include <stdlib.h>
@@ -6,7 +7,7 @@
 ArrayList* array_list_create(void (*item_destroyer)(void* item)) {
   ArrayList* list = (ArrayList*)malloc(sizeof(ArrayList));
   if (list == NULL) {
-    perror("ERROR: Could not allocate memory for array list struct");
+    log_perror("ERROR: Could not allocate memory for array list struct");
     return NULL;
   }
 
@@ -42,7 +43,7 @@ static bool array_list_extend(ArrayList* array_list) {
     new_capacity = INITIAL_ARRAY_SIZE;
   void* new_items = realloc(array_list->items, new_capacity * sizeof(void*));
   if (new_items == NULL) {
-    perror("ERROR: Could not reallocate memory for array list items");
+    log_perror("ERROR: Could not reallocate memory for array list items");
     return false;
   }
   array_list->items = new_items;
@@ -68,7 +69,7 @@ void** array_list_to_array(const ArrayList* array_list) {
   }
   void** array = malloc(array_list->size * sizeof(void*));
   if (array == NULL) {
-    perror("Could not malloc space for array from array list!");
+    log_perror("Could not malloc space for array from array list!");
     return NULL;
   }
   memcpy(array, array_list->items, array_list->size * sizeof(void*));